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QuickBooks Desktop Integrated Options


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QuickBooks Enhanced


  • Integrates with QuickBooks
  • Enter hours directly or timesheet
  • Job costing/billable hours
  • Payroll tax tables
  • Track pre/post tax deductions
  • Class tracking
  • Direct deposit fee *
  • Pay Federal withholding tax
  • File 941 Federal payroll tax return
  • File State withholding return
  • File & pay State Unemployment tax
  • File & pay 940 Tax (FUTA)
  • File W3 & W2
  • Limit 800 EE – W2s

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QuickBooks Assisted


  • All features of QuickBooks Enhanced, PLUS
  • Track Detailed Job Costing
  • Track Payroll by Class
  • Allocated Tips
  • Negative checks (used for Restaurant Industry)
  • Union Dues
  • Prevailing wage calculation – you file form (QuickBooks Premier or QuickBooks Enterprise)
  • Federal withholding tax paid for you
  • State withholding tax paid for you *
  • File 941 Federal payroll tax return filed for you
  • State Quarterly & Annual return filed for you
  • 940 Federal Payroll tax return filed for you
  • W3 & W2 filed for you
  • Limit 150 EE -W2s

*Can not do in WY or IN

QuickBooks Online Integrated Options


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QuickBooks Enhanced


  • Integrates with QuickBooks
  • Enter hours directly or timesheet
  • Payroll tax tables
  • Track pre/post tax deductions
  • Pay & File 941 Federal payroll tax return
  • Pay & File State Quarterly and Annual returns
  • Pay & File State Unemployment returns
  • Pay & File City Quarterly and Annual returns
  • Pay & File 940 Annual return
  • File W3 & W2 payroll tax return
  • 24 hour direct deposit available
  • Limit 150 EE -W2s

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QuickBooks Full Service Payroll


  • All features of QuickBooks Online Enhanced, PLUS
  • SETUP DONE FOR YOU!
  • Federal withholding tax paid for you
  • State withholding tax paid for you
  • City withholding tax paid for you
  • File 941 Federal payroll tax return filed for you
  • State Quarterly & Annual return filed for you
  • State Unemployment return filed for you
  • City Withholding tax return filed for you
  • 940 Federal Payroll tax return filed for you
  • W3 & W2 payroll tax return filed for you
  • New hire reporting filed for you
  • Pay 1099 Subcontractors with Direct Deposit
  • 24 hour direct deposit available
  • Limit 150 EE -W2s and 1099s

Please note that 98% of the city taxes are in the tables, but a handful of counties in OH & PA

QuickBooks Stand alone option


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Intuit Full Service Payroll


  • Integrates with QuickBooks Desktop or QuickBooks Online with an export connection
  • Enter hours
  • SETUP DONE FOR YOU!
  • Payroll tax tables
  • Track pre/post tax deductions
  • Federal withholding tax paid for you
  • State withholding tax paid for you
  • City withholding tax paid for you
  • File 941 Federal payroll tax return filed for you
  • State Quarterly & Annual return filed for you
  • State Unemployment return filed for you
  • City Withholding tax return filed for you
  • 940 Federal Payroll tax return filed for you
  • W3 & W2 payroll tax return filed for you
  • New hire reporting filed for you
  • Pay 1099 Subcontractors with Direct Deposit
  • 1096/1099 filed for you
  • Limit 150 EE -W2s

Payroll Information Sheets

Intuit Payroll flyers are available as a resource to our clients. They have great information on the different options for Intuit Payroll.



Learn more about Intuit Payroll

Learn More

If you want to run your own payroll and pay your own taxes and have 20 or more employees, you are better served by purchasing QuickBooks Enterprise Gold Edition. There are no additional subscriptions for payroll and direct deposit is free.

Read our blog to learn more about QB Payroll here